USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: O43179 USC-OGP 2-DE database:  O43179 O43179 General information about the entry View entry in simple text format Entry name TSSC1_HUMAN Primary accession number Q53HC9 Secondary accession number(s) O43179 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Protein TSSC1; AltName: Full=EARP-interacting protein {ECO:0000250|UniProtKB:Q5PPK9}; AltName: Full=Endosome-associated recycling protein-interacting protein {ECO:0000250|UniProtKB:Q5PPK9}; AltName: Full=Tumor-suppressing STF cDNA 1 protein; AltName: Full=Tumor-suppressing subchromosomal transferable fragment candidate gene 1 protein;. Gene name Name=EIPR1 {ECO:0000250|UniProtKB:Q5PPK9} Synonyms=TSSC1 {ECO:0000312|HGNC:HGNC:12383} Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-5 {PLATELET 4-5} Homo sapiens (Human)   map experimental info   PLATELET_4-5 MAP LOCATIONS: SPOT OGP-0065: pI=4.80; Mw=52318 Cross-references UniProtKB/Swiss-Prot Q53HC9; TSSC1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name TSSC1_HUMAN Primary accession number Q53HC9 Secondary accession number(s) D6W4Y1 O43179 Q53S19 Q53SG2 Sequence was last modified on  December 20, 2005 (version 2) Annotations were last modified on  March 15, 2017 (version 110) Name and origin of the protein Description RecName: Full=Protein TSSC1; AltName: Full=EARP-interacting protein {ECO:0000250|UniProtKB:Q5PPK9}; AltName: Full=Endosome-associated recycling protein-interacting protein {ECO:0000250|UniProtKB:Q5PPK9}; AltName: Full=Tumor-suppressing STF cDNA 1 protein; AltName: Full=Tumor-suppressing subchromosomal transferable fragment candidate gene 1 protein; Gene name Name=EIPR1 {ECO:0000250|UniProtKB:Q5PPK9} Synonyms=TSSC1 {ECO:0000312|HGNC:HGNC:12383} Encoded on Name=EIPR1 {ECO:0000250|UniProtKB:Q5PPK9}; Synonyms=TSSC1 {ECO:0000312|HGNC:HGNC:12383 Keywords Acetylation; Complete proteome; Phosphoprotein; Reference proteome; Repeat; WD repeat. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF019952; AAC51911.1; -; mRNA EMBL AK222652; BAD96372.1; -; mRNA EMBL AC019118; AAY24338.1; -; Genomic_DNA EMBL AC073502; AAY24193.1; -; Genomic_DNA EMBL CH471053; EAX01070.1; -; Genomic_DNA EMBL CH471053; EAX01071.1; -; Genomic_DNA EMBL BC002485; AAH02485.1; -; mRNA CCDS CCDS1651.1; -; . RefSeq NP_003301.1; NM_003310.3; . UniGene Hs.502770; -; . ProteinModelPortal Q53HC9; -; . BioGrid 113111; 51; . IntAct Q53HC9; 17; . STRING 9606.ENSP00000371559; -; . iPTMnet Q53HC9; -; . PhosphoSitePlus Q53HC9; -; . BioMuta TSSC1; -; . DMDM 84029603; -; . OGP O43179; -; . EPD Q53HC9; -; . MaxQB Q53HC9; -; . PaxDb Q53HC9; -; . PeptideAtlas Q53HC9; -; . PRIDE Q53HC9; -; . DNASU 7260; -; . Ensembl ENST00000382125; ENSP00000371559; ENSG00000032389; . GeneID 7260; -; . KEGG hsa:7260; -; . UCSC uc002qxj.3; human; . CTD 7260; -; . DisGeNET 7260; -; . GeneCards TSSC1; -; . HGNC HGNC:12383; TSSC1; . HPA HPA031231; -; . HPA HPA031232; -; . HPA HPA031233; -; . HPA HPA031234; -; . MIM 608998; gene; . neXtProt NX_Q53HC9; -; . OpenTargets ENSG00000032389; -; . PharmGKB PA37051; -; . eggNOG KOG1007; Eukaryota; . eggNOG ENOG410XRIE; LUCA; . GeneTree ENSGT00730000111137; -; . HOGENOM HOG000264967; -; . HOVERGEN HBG052937; -; . InParanoid Q53HC9; -; . PhylomeDB Q53HC9; -; . TreeFam TF105847; -; . SignaLink Q53HC9; -; . GeneWiki TSSC1; -; . GenomeRNAi 7260; -; . PRO PR:Q53HC9; -; . Proteomes UP000005640; Chromosome 2; . Bgee ENSG00000032389; -; . CleanEx HS_TSSC1; -; . ExpressionAtlas Q53HC9; baseline; . Genevisible Q53HC9; HS; . Gene3D 2.130.10.10; -; 1; . InterPro IPR015943; WD40/YVTN_repeat-like_dom; . InterPro IPR001680; WD40_repeat; . InterPro IPR019775; WD40_repeat_CS; . InterPro IPR017986; WD40_repeat_dom; . Pfam PF00400; WD40; 2; . SMART SM00320; WD40; 5; . PROSITE PS00678; WD_REPEATS_1; 1; . PROSITE PS50082; WD_REPEATS_2; 1; . PROSITE PS50294; WD_REPEATS_REGION; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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